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Poly(ADP-Ribose) Polymerase
Poly(ADP-Ribose) Polymerase
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Part I. Biochemical Approaches, In vitro and In vivo 1. Approaches to Detect PARP-1 Activation In vivo, In situ, and In vitro Girsih M. Shah, Febitha Kandan-Kulangara, Alicia Montoni, Rashmi G. Shah, Julie Brind'Amour, Momchil D. Vodenicharov, and El Bachir Affar 2. Quantification of Poly(ADP-ribose) In vitro: Determination of the (ADP-ribose) Chain Length and Branching Pattern Rafael Alvarez-Gonzalez and Myron K. Jacobson 3. Assay for Protein Modification by Poly-ADP-Ribose In vitro Opeyemi A.…
  • Publisher:
  • Year: 2016
  • Pages: 521
  • ISBN-10: 1493962159
  • ISBN-13: 9781493962150
  • Format: 17.8 x 25.4 x 2.8 cm, minkšti viršeliai
  • Language: English
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Part I. Biochemical Approaches, In vitro and In vivo

1. Approaches to Detect PARP-1 Activation In vivo, In situ, and In vitro

Girsih M. Shah, Febitha Kandan-Kulangara, Alicia Montoni, Rashmi G. Shah, Julie Brind'Amour, Momchil D. Vodenicharov, and El Bachir Affar

2. Quantification of Poly(ADP-ribose) In vitro: Determination of the (ADP-ribose) Chain Length and Branching Pattern

Rafael Alvarez-Gonzalez and Myron K. Jacobson

3. Assay for Protein Modification by Poly-ADP-Ribose In vitro

Opeyemi A. Olabisi and Chi-Wing Chow

4. Identification of Distinct Amino Acids as ADP-ribose Acceptor Sites by Mass Spectrometry

Florian Rosenthal, Simon Messner, Bernd Roschitzki, Peter Gehrig, Paolo Nanni, and Micahel O. Hottiger

5. Non-covalent Protein Interaction with Poly(ADP-ribose)

Maria Malanga and Felix R. Althaus

6. Non-covalent pADPr Interaction with Protein and Competition with RNA for Binding to Proteins

Yingbiao Ji

7. Affinity-based Assays for the Identification and Quantitative Evaluation of Non-covalent Poly(ADP-ribose)-binding Proteins

Jean-Phillipe Gagné, Jean-François Haince, Émilie Pic, and Guy G. Poirier

8. Detecting and Quantifying pADPr In vivo

Yi-Chen Lai, Rajesh K. Aneja, Margaret A. Satchell, and Robert S. B. Clark

9. Purification of Recombinant Poly(ADP-ribose) Polymerases

Jean-Christophe Amé, Thomas Kalish, Françoise Dantzer, and Valérie Schreiber

10. Methods for Purification of Proteins Associated with Cellular poly(ADP-risbose) and PARP-specific Poly(ADP-ribose)

Jennifer E. Rood, Anthony K. L. Leung, and Paul Chang

11. Purification and Characterization of Poly(ADP-ribosyl)ated DNA Replication/Repair Complexes

Cynthia M. Simbulan-Rosenthal, Dean S. Rosenthal, and Mark E. Smulson

12. PARP1 Genomics: Chromatin Immuno-precipitation Approach using Anti-PARP1 Antibody (ChIP and ChIP-seq)

Niraj Lodhi and Alexei V. Tulin

13. Purification of Human PARP-1 and PARP-1 Domains from E. coli for Structural and Biochemical Analysis

Marie-France Langelier, Jamie L. Planck, Kristin M. Servent, and John M. Pascal

14. Regulation of Chromatin Structure by PARP-1

MiYoung Kim

Part II. Genetic Manipulation Approaches

15. The Use of PARP Inhibitors in Cancer Therapy: Use as Adjuvant with Chemotherapy or Radiotherapy, Use as a Single Agent in Susceptible Patients; Techniques used to Identify Susceptible Agents

Sydney Shall, Terry Gaymes, Farzin Farzaneh, Nicola Curtin, and Ghulam J. Mufti

16. Quantification of PARP Activity in Human Tissues: Ex vivo Assays in Blood Cells, and Immunohistochemistry in Human Biopsies

Eszter M. Horvath, Zsuzsanna K. Zsengellér, and Csaba Szabo

17. Assay for Hypermethilation of the BRCA1 Gene Promoter in Tumor Cells to Predict Sensitivity to PARP-Inhibitor Therapy

Ilsiya Ibragimova and Pauls Cairns

18. Generation of Poly(ADP-ribosyl)ation Deficient Mutants of the Transcription Factor, CTCF

Dawn Farrar, Igor Chernukhin, and Elena Klenova

19. Phenotypic Characterization of Parp-1 and Parp-2 Deficient Mice and Cells

Christian Boehler, Laurent Gauthier, Jose Yelamos, Aurélia Noll, Valérie Schreiber, and Françoise Dantzer

20. Poly(ADP-ribosyl)ation Pathways in Mammals: The Advantage of Murine PARG Null Mutation

Yiran Zhou and David W. Koh

21. Genetic Approaches to Targeti

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  • Publisher:
  • Year: 2016
  • Pages: 521
  • ISBN-10: 1493962159
  • ISBN-13: 9781493962150
  • Format: 17.8 x 25.4 x 2.8 cm, minkšti viršeliai
  • Language: English English

Part I. Biochemical Approaches, In vitro and In vivo

1. Approaches to Detect PARP-1 Activation In vivo, In situ, and In vitro

Girsih M. Shah, Febitha Kandan-Kulangara, Alicia Montoni, Rashmi G. Shah, Julie Brind'Amour, Momchil D. Vodenicharov, and El Bachir Affar

2. Quantification of Poly(ADP-ribose) In vitro: Determination of the (ADP-ribose) Chain Length and Branching Pattern

Rafael Alvarez-Gonzalez and Myron K. Jacobson

3. Assay for Protein Modification by Poly-ADP-Ribose In vitro

Opeyemi A. Olabisi and Chi-Wing Chow

4. Identification of Distinct Amino Acids as ADP-ribose Acceptor Sites by Mass Spectrometry

Florian Rosenthal, Simon Messner, Bernd Roschitzki, Peter Gehrig, Paolo Nanni, and Micahel O. Hottiger

5. Non-covalent Protein Interaction with Poly(ADP-ribose)

Maria Malanga and Felix R. Althaus

6. Non-covalent pADPr Interaction with Protein and Competition with RNA for Binding to Proteins

Yingbiao Ji

7. Affinity-based Assays for the Identification and Quantitative Evaluation of Non-covalent Poly(ADP-ribose)-binding Proteins

Jean-Phillipe Gagné, Jean-François Haince, Émilie Pic, and Guy G. Poirier

8. Detecting and Quantifying pADPr In vivo

Yi-Chen Lai, Rajesh K. Aneja, Margaret A. Satchell, and Robert S. B. Clark

9. Purification of Recombinant Poly(ADP-ribose) Polymerases

Jean-Christophe Amé, Thomas Kalish, Françoise Dantzer, and Valérie Schreiber

10. Methods for Purification of Proteins Associated with Cellular poly(ADP-risbose) and PARP-specific Poly(ADP-ribose)

Jennifer E. Rood, Anthony K. L. Leung, and Paul Chang

11. Purification and Characterization of Poly(ADP-ribosyl)ated DNA Replication/Repair Complexes

Cynthia M. Simbulan-Rosenthal, Dean S. Rosenthal, and Mark E. Smulson

12. PARP1 Genomics: Chromatin Immuno-precipitation Approach using Anti-PARP1 Antibody (ChIP and ChIP-seq)

Niraj Lodhi and Alexei V. Tulin

13. Purification of Human PARP-1 and PARP-1 Domains from E. coli for Structural and Biochemical Analysis

Marie-France Langelier, Jamie L. Planck, Kristin M. Servent, and John M. Pascal

14. Regulation of Chromatin Structure by PARP-1

MiYoung Kim

Part II. Genetic Manipulation Approaches

15. The Use of PARP Inhibitors in Cancer Therapy: Use as Adjuvant with Chemotherapy or Radiotherapy, Use as a Single Agent in Susceptible Patients; Techniques used to Identify Susceptible Agents

Sydney Shall, Terry Gaymes, Farzin Farzaneh, Nicola Curtin, and Ghulam J. Mufti

16. Quantification of PARP Activity in Human Tissues: Ex vivo Assays in Blood Cells, and Immunohistochemistry in Human Biopsies

Eszter M. Horvath, Zsuzsanna K. Zsengellér, and Csaba Szabo

17. Assay for Hypermethilation of the BRCA1 Gene Promoter in Tumor Cells to Predict Sensitivity to PARP-Inhibitor Therapy

Ilsiya Ibragimova and Pauls Cairns

18. Generation of Poly(ADP-ribosyl)ation Deficient Mutants of the Transcription Factor, CTCF

Dawn Farrar, Igor Chernukhin, and Elena Klenova

19. Phenotypic Characterization of Parp-1 and Parp-2 Deficient Mice and Cells

Christian Boehler, Laurent Gauthier, Jose Yelamos, Aurélia Noll, Valérie Schreiber, and Françoise Dantzer

20. Poly(ADP-ribosyl)ation Pathways in Mammals: The Advantage of Murine PARG Null Mutation

Yiran Zhou and David W. Koh

21. Genetic Approaches to Targeti

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