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- Publisher: Humana
- ISBN-10: 1071615335
- ISBN-13: 9781071615331
- Format: 19.6 x 25.9 x 2 cm, hardcover
- Language: English
- SAVE -10% with code: EXTRA
Modeling Transcriptional Regulation (e-book) (used book) | bookbook.eu
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1. Co-expression Networks in Predicting Transcriptional Gene Regulation
Synan F. AbuQamar, Khaled A. El-Tarabily, and Arjun Sham
2. Inference of Gene Coexpression Networks from Bulk-based RNA-Sequencing Data
Running-title: Inference of GCNs from bulk-based RNA-Seq
Alicia T. Lamere
3. Genomic Footprinting Analyses from DNase-seq data to Construct Gene Regulatory Networks
Tomás C. Moyano, Rodrigo A. Gutiérrez, and José M. Alvarez
4. Spatiotemporal Gene Expression Profiling and Network Inference: A Roadmap For Analysis, Visualization, and Key Gene Identification
Ryan Spurney, Michael Schwartz, Mariah Gobble, Rosangela Sozzani, and Lisa Van den Broeck
5. Dynamic Modeling of Transcriptional Gene Regulatory Networks
Joanna E Handzlik, Yen Lee Loh, and Manu
6. Mathematical Programming for Modelling Expression of a Gene using Gurobi Optimizer to Identify its Transcriptional Regulators
Vijaykumar Yogesh Muley
7. Multiscale Modeling of Cross-Regulatory Transcript and Protein Influences
Megan L. Matthews and Cranos M. Williams
8. Biological Network Mining
Zongliang Yue, Da Yan, Guimu Guo, Jake Y. Chen
9. Identification of Gene Regulatory Networks from Single-Cell Expression Data
Song Li, Haidong Yan, and Jiyoung Lee
10. Inference of Gene Regulatory Network From Single-Cell Transcriptomic Data using pySCENIC
Nilesh Kumar, Bharat Mishra, Mohammad Athar, M. Shahid Mukhtar
11. Modeling Immune Dynamics in Plants using JIMENA-package
Ãzge Osmanoglu, Shabana Shams, Thomas Dandekar, and Muhammad Naseem
12. Dynamic Regulatory Event Mining by iDREM in Large Scale Multi-Omics Datasets during Biotic and Abiotic Stress in Plants
Bharat Mishra, Nilesh Kumar, Jinbao Liu, and Karolina M. Pajerowska-Mukhtar
13. A semi-in vivo Transcriptional Assay to Dissect Plant Defense Regulatory Modules
Fatimah Aljedaani, Naganand Rayapuram, and Ikram Blilou
14. Assessing Global Circadian Rhythm through Single-Time-Point Transcriptomic Analysis
Xingwei Wang, Yufeng Xu, Mian Zhou, and Wei Wang
15. High-throughput Targeted Transcriptional Profiling of Defense Genes using RNA-mediated oligonucleotide Annealing, Selection, and Ligation with next-generation sequencing in Arabidopsi
Sung-Il Kim, Yogendra Bordiya, Ji-Chul Nam, José Mayorga, and Hong-Gu Kang
16. Rapid Validation of Transcriptional Enhancers Using a Transient Reporter Assay
Yuan Lin and Jiming Jiang
17. Computational Identification of ceRNA and Reconstruction of ceRNA Regulatory Network Based on RNA-seq and Small RNA-seq Data in Plants
Xiangyuan Wan and Ziwen Li
18. In Silico Prediction for ncRNAs in Prokaryotes
Amanda Carvalho Garcia
19. Mathematical Linear Programming to Model MicroRNAs-Mediated Gene Regulation Using Gurobi Optimizer
Vijaykumar Yogesh Muley
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- Publisher: Humana
- ISBN-10: 1071615335
- ISBN-13: 9781071615331
- Format: 19.6 x 25.9 x 2 cm, hardcover
- Language: English English
1. Co-expression Networks in Predicting Transcriptional Gene Regulation
Synan F. AbuQamar, Khaled A. El-Tarabily, and Arjun Sham
2. Inference of Gene Coexpression Networks from Bulk-based RNA-Sequencing Data
Running-title: Inference of GCNs from bulk-based RNA-Seq
Alicia T. Lamere
3. Genomic Footprinting Analyses from DNase-seq data to Construct Gene Regulatory Networks
Tomás C. Moyano, Rodrigo A. Gutiérrez, and José M. Alvarez
4. Spatiotemporal Gene Expression Profiling and Network Inference: A Roadmap For Analysis, Visualization, and Key Gene Identification
Ryan Spurney, Michael Schwartz, Mariah Gobble, Rosangela Sozzani, and Lisa Van den Broeck
5. Dynamic Modeling of Transcriptional Gene Regulatory Networks
Joanna E Handzlik, Yen Lee Loh, and Manu
6. Mathematical Programming for Modelling Expression of a Gene using Gurobi Optimizer to Identify its Transcriptional Regulators
Vijaykumar Yogesh Muley
7. Multiscale Modeling of Cross-Regulatory Transcript and Protein Influences
Megan L. Matthews and Cranos M. Williams
8. Biological Network Mining
Zongliang Yue, Da Yan, Guimu Guo, Jake Y. Chen
9. Identification of Gene Regulatory Networks from Single-Cell Expression Data
Song Li, Haidong Yan, and Jiyoung Lee
10. Inference of Gene Regulatory Network From Single-Cell Transcriptomic Data using pySCENIC
Nilesh Kumar, Bharat Mishra, Mohammad Athar, M. Shahid Mukhtar
11. Modeling Immune Dynamics in Plants using JIMENA-package
Ãzge Osmanoglu, Shabana Shams, Thomas Dandekar, and Muhammad Naseem
12. Dynamic Regulatory Event Mining by iDREM in Large Scale Multi-Omics Datasets during Biotic and Abiotic Stress in Plants
Bharat Mishra, Nilesh Kumar, Jinbao Liu, and Karolina M. Pajerowska-Mukhtar
13. A semi-in vivo Transcriptional Assay to Dissect Plant Defense Regulatory Modules
Fatimah Aljedaani, Naganand Rayapuram, and Ikram Blilou
14. Assessing Global Circadian Rhythm through Single-Time-Point Transcriptomic Analysis
Xingwei Wang, Yufeng Xu, Mian Zhou, and Wei Wang
15. High-throughput Targeted Transcriptional Profiling of Defense Genes using RNA-mediated oligonucleotide Annealing, Selection, and Ligation with next-generation sequencing in Arabidopsi
Sung-Il Kim, Yogendra Bordiya, Ji-Chul Nam, José Mayorga, and Hong-Gu Kang
16. Rapid Validation of Transcriptional Enhancers Using a Transient Reporter Assay
Yuan Lin and Jiming Jiang
17. Computational Identification of ceRNA and Reconstruction of ceRNA Regulatory Network Based on RNA-seq and Small RNA-seq Data in Plants
Xiangyuan Wan and Ziwen Li
18. In Silico Prediction for ncRNAs in Prokaryotes
Amanda Carvalho Garcia
19. Mathematical Linear Programming to Model MicroRNAs-Mediated Gene Regulation Using Gurobi Optimizer
Vijaykumar Yogesh Muley
Reviews