Description
1. LncRNA Pulldown Combined with Mass Spectrometry to Identify the Novel LncRNA-Associated Proteins
Zhen Xing, Chunru Lin, and Liuqing Yang
2. Cross-Linking Immunoprecipitation and qPCR (CLIP-qPCR) Analysis to Map Interactions between Long Non-Coding RNAs and RNA-Binding Proteins
Je-Hyun Yoon and Myriam Gorospe
3. Characterization of Long Non-Coding RNA Associated Proteins by RNA-Immunoprecipitation
Youyou Zhang, Yi Feng, Zhongyi Hu, Xiaowen Hu, Chao-Xing Yuan, Yi Fan, Lin Zhang 4. Isolation of Protein Complexes Associated with Long Non-Coding RNAs
Kiranmai Gumireddy, Jinchun Yan, and Qihong Huang
5. Profiling Long Non-Coding RNA Expression Using Custom-Designed Microarray
Xinna Zhang, Gabriel Lopez-Berestein, Anil K. Sood, and George A. Calin
6. Long Non-Coding RNA Expression Profiling Using Arraystar LncRNA Microarrays
Yanggu Shi and Jindong Shang
7. Nuclear RNA Isolation and Sequencing
Navroop K. Dhaliwal and Jennifer A. Mitchell
8. Targeted LncRNA Sequencing with the SeqCap RNA Enrichment System
John C. Tan, Venera D. Bouriakov, Liang Feng, Todd A. Richmond, and Daniel Burgess
9. ChIP-Seq: Library Preparation and Sequencing
Karyn L. Sheaffer and Jonathan Schug
10. Stellaris (R) RNA Fluorescence In Situ Hybridization for the Simultaneous detection of Immature and Mature Long Non-Coding RNAs in Adherent Cells
Arturo V. Orjalo, Jr., and Hans E. Johansson
11. Simultaneous RNA-DNA FISH
Lan-Tian Lai, Zhenyu Meng, Fangwei Shao & Li-Feng Zhang
12. Visualizing Long Non-Coding RNAs on Chromatin
Michael Hinten, Emily Maclary, Srimonta Gayen, Clair Harris, and Sundeep Kalantry
13. Non-Isotopic Method for
In Situ LncRNA Visualization and Quantitation
Botoul Maqsodi and Corina Nikoloff
14. Detection of Long Non-Coding RNA Expression by Non-Radioactive Northern Blots
Xiaowen Hu, Yi Feng, Zhongyi Hu, Youyou Zhang, Chao-Xing Yuan, Xiaowei Xu, and Lin Zhang
15. Assessment of
In Vitro SiRNA Delivery in Cancer Mouse Models
Hiroto Hatakeyama, Sherry Y. Wu, Lingegowda S. Mangala, Gabriel Lopez-Berestein, and Anil K. Sood
16. Targeting Long Non-Coding RNA with Antisense Oligonucleotide Technology as Cancer Therapeutics
Tianyuan Zhou, Youngsoo Kim, and A. Robert Macleod
17. Characterization of Circular RNAs
Yang Zhang, Li Yang, and Ling-Ling Chen18.
Methods for Characterization of Alternative RNA Splicing
Samuel E. Harvey and Chonghui Cheng
19. NONCODEv4: Annotation of Non-Coding RNAs with Emphasis on Long Non-Coding RNAs
Yi Zhao, Jiao Yuan, and Runsheng Chen
20. Computational Analysis of LncRNA from cDNA Sequences
Susan Boerner and Karen M. McGinnis
21. Analyzing MiRNA: LncRNA Interactions
Maria D. Paraskevopoulou and Artemis G. Hatzigeoriou
22. Long Non-Coding RNAs: An Overview
Dongmei Zhang, Minmin Xiong, Congjian Xu, Peng Xiang, and Xiaomin Zhong
Reviews