Genome-Wide Association Studies (e-book) (used book) | bookbook.eu

Description

Part I: Reviews and Overviews

1. Designing a Genome-Wide Association Study: Main Steps and Critical Decisions

François Belzile and Davoud Torkamaneh

2. Preparation and Curation of Phenotypic Datasets

Santiago Alvarez Prado, Fernando Hernandez, Ana Laura Achilli, and Agustina Amelong

3. Genotyping Platforms for Genome-Wide Association Studies: Options and Practical Considerations

David L. Hyten

4. Genome-Wide Association Study Statistical Models: A Review

Mohsen Yoosefzadeh-Najafabadi, Milad Eskandari, Francois Belzile, and Davoud Torkamaneh

5. Interpretation of Manhattan Plots and Other Outputs of Genome-Wide Association Studies

Jiabo Wang, Jianming Yu, Alexander E. Lipka, and Zhiwu Zhang

Part II: Phenotypic Data for GWAS

6. Preparation and Curation of Multi-Year, Multi-Location, Multi-Trait Datasets

Amina Abed and Zakaria Kehel

7. Development, Preparation, and Curation of High-Throughput Phenotypic Data for Genome-Wide Association Studies: A Sample Pipeline in R

Pasquale Tripodi

8. Preparation and Curation of Omics Data for Genome-Wide Association Studies

Feng Zhu, Alisdair R. Fernie, and Federico Scossa

Part III: Genotypic Data and Assessment of Population Structure

9. Producing High-Quality Single Nucleotide Polymorphism Data for Genome-Wide Association Studies

Philipp E. Bayer, Mitchell Gill, Monica F. Danilevicz, and David Edwards

10. A Practical Guide to Using Structural Variants for Genome-Wide Association Studies

Marc-André Lemay and Sidiki Malle

11. Data Integration, Imputation, and Meta-Analysis for Genome-Wide Association Studies

Reem Joukhadar and Hans D. Daetwyler

12. Population Structure and Relatedness for Genome-Wide Association Studies

Sidiki Malle

Part IV: Bioinformatics Tools for GWAS

13. Performing Genome-Wide Association Studies with Multiple Models Using GAPIT

Jiabo Wang, You Tang, and Zhiwu Zhang

14. Performing Genome-Wide Association Studies Using rMVP

Xiaolei Liu, Lilin Yin, Haohao Zhang, Xinyun Li, and Shuhong Zhao

Part V: Identification of Candidate Genes and Validation

15. Identification and Validation of Candidate Genes from Genome-Wide Association Studies

Elise Albert and Christopher Sauvage

16. Bipare