Functional Analysis of Long Non-Coding RNAs (e-book) (used book) | bookbook.eu

Description

1. Bioinformatics Approaches for Functional Prediction of Long Non-Coding RNAs

Fayaz Seifuddin and Mehdi Pirooznia

2. Visualization of lncRNA and mRNA Structure Models within the Integrative Genomics Viewer

Steven Busan and Kevin M. Weeks

3. RNA Coding Potential Prediction Using Alignment-Free Logistic Regression Model

Ying Li and Liguo Wang

4. Classification of Long Non-Coding RNAs by K-mer Content

Jessime M. Kirk, Daniel Sprague, and J. Mauro Calabrese

5. Genome-Wide Computational Analysis and Validation of Potential Long Non-Coding RNA-Mediated DNA-DNA: RNA Triplexes in the Human Genome

Saakshi Jalali, Amrita Singh, Vinod Scaria, and Souvik Maiti

6. Using INFERNO to Infer the Molecular Mechanisms Underlying Non-Coding Genetic Associations

Alexandre Amlie-Wolf, Pavel P. Kuksa, Chien-Yueh Lee, Elisabeth Mlynarski, Yuk Yee Leung, and Li-San Wang

7. A Bioinformatic Pipeline to Integrate GWAS and eQTL Datasets to Identify Disease Relevant Human Long Non-Coding RNAs

Yi Chen, Ping Li, and Haiming Cao

8. AnnoLnc: A One-Stop Portal to Systematically Annotate Novel Human Long Non-Coding RNAs

De-Chang Yang, Lan Ke, Yang Ding, and Ge Gao

9. Annotation of Full-Length Long Non-Coding RNAs with Capture Long-Read Sequencing (CLS)

Silvia Carbonell Sala, Barbara Uszczyńska-Ratajczak, Julien Lagarde, Rory Johnson, and Roderic Guigo

10. Single-Cell Analysis of Long Non-Coding RNAs (lncRNAs) in Mouse Brain Cells

Boyang Zhang, Wentao Xu, and James Eberwine

11. Detection and Characterization of Ribosome-Associated Long Non-Coding RNAs

Chao Zeng and Michiaki Hamada

12. Analysis of Annotated and Unannotated Long Non-Coding RNAs from Exosome Subtypes Using Next-Generation RNA Sequencing

Wittaya Suwakulsiri, Maoshan Chen, David W. Greening, Rong Xu, and Richard J. Simpson

13. DMS-MaPseq for Genome-Wide or Targeted RNA Structure Probing In Vitro and In Vivo

Phillip Tomezsko, Harish Swaminathan, and Silvi Rouskin

14. Labeling and Purification of Temporally Expressed RNAs during the S-Phase of the Cell Cycle in Living Cells

15. A Quick Immuno-FISH Protocol for Detecting RNAs, Proteins, and Chromatin Modifications

Akiyo Ogawa and Yuya Ogawa

16. M(R)apping RNA-Protein Interactions

Jasmine Barra, Roberto Vendramin, and Eleonora Leucci