Data Mining for Systems Biology (e-book) (used book) | bookbook.eu

Description

1. Dense Module Enumeration in Biological Networks

Koji Tsuda and Elisabeth Georgii

2. Discovering Interacting Domains and Motifs in Protein-Protein Interactions

Hugo Willy, Wing-Kin Sung, and See-Kiong Ng.

3. Global Alignment of Protein-Protein Interaction Networks

Misael Mongiov__ Roded Sharan

4. Structure Learning for Bayesian Networks as Models of Biological Networks

Antti Larjo, Ilya Shmulevich, and Harri L]ahdesm]aki

5. Supervised Inference of Gene Regulatory Networks from Positive Examples

Fantine Mordelet and Jean-Phillippe Vert

6. Mining Regulatory Network Connections by Ranking Transcription Factor Target Genes using Time Series Expression Data

Annti Honkela, Magnus Rattray, and Neil D. Lawrence

7. Identifying Pathways of Co-ordinated Gene Expression

Timothy Hancock, Ichigaku Takigawa, and Hiroshi Mamitsuka

8. Mining Frequent Subtrees in Glcan Data using the RINGS Glycan Miner Tool

Kiyoko Flora Aoki-Kinoshita

9. Chemogenomic Approaches to Infer Drug-target Interaction Networks

Yoshihiro Yamanishi

10. Localization Prediction and Structure-based in Silico Analysis of Bacterial Proteins- with Emphasis on Outer Membrane Proteins

Kenichiro Imai, Sikander Hayat, Noriyuki Sakiyama, Naoya Fujita, Kentaro Tomii, Arne Elofsson, and Paul Horton

11. Analysis Strategy of Protein-Protein Interaction Networks

Zhenjun Hu

12. Data Mining in the MetaCyc Family of Pathway Databases

Peter D. Karp, Suzanne Paley, and Tomer Altman

13. Gene Set/Pathway Enrichment Analysis

Jui-Hung Hung

14. Construction of Functional Linkage Gene Networks by Data Integration

Bolan Linghu, Eric A. Franzosa, Yu Xia

15. Genome-Wide Association Studies

Tun-Hsiang Yang, Mark Kon, Charles DeLisi

16. Viral Genome Analysis and Knowledge Management

Carla Kuiken, Hyejin Yoon, Werner Abfalterer, Brian Gaschen, Chienchi Lo, Bette Korber

Minoru Kanehisa